Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CHST5	HGNC:1973 (HGNC) 23563 (Entrez Gene) 604817 (OMIM) CHST5 (Alliance of Genome Resources)	Chr16 q23.1	Chr16:75528530-75536108 (-) GRCh38		Q9GZS9 (UniProt | EBI) NM_012126 (RefSeq)
	CHST6	HGNC:6938 (HGNC) 4166 (Entrez Gene) 605294 (OMIM) CHST6 (Alliance of Genome Resources)	Chr16 q23.1	Chr16:75472042-75495445 (-) GRCh38	macular corneal dystrophy	Q9GZX3 (UniProt | EBI) NM_021615 (RefSeq)
mouse	Chst5	MGI:1931825 (MGI) 56773 (Entrez Gene) Gene Tree Chst5 (Alliance of Genome Resources)	Chr8 58.11 cM	Chr8:112615767-112636831 (-) GRCm39		56773 (NCBI Gene Model) Q9QUP4 (UniProt | EBI) NM_019950 (RefSeq)
rat	Chst5	RGD:1561144 (Rat Genome Database) 307859 (Entrez Gene) Chst5 (Alliance of Genome Resources)	Chr19 q12			NP_001100901 (RefSeq) NM_001107431 (RefSeq)
zebrafish	chst6	ZDB-GENE-060810-74 (Zebrafish Model Organism Database) 100170782 (Entrez Gene) chst6 (Alliance of Genome Resources)	Chr25			NP_001124093 (RefSeq) NM_001430962 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.