Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SPART	HGNC:18514 (HGNC) 23111 (Entrez Gene) 607111 (OMIM) SPART (Alliance of Genome Resources)	Chr13 q13.3	Chr13:36301638-36370180 (-) GRCh38	Troyer syndrome	Q8N0X7 (UniProt | EBI) NM_001142294 (RefSeq)
mouse	Spart	MGI:2139806 (MGI) 229285 (Entrez Gene) Gene Tree Spart (Alliance of Genome Resources)	Chr3 26.53 cM	Chr3:55019529-55044743 (+) GRCm39	Troyer syndrome	ENSMUSG00000036580 (Ensembl Gene Model) ENSMUSP00000113621 (Ensembl) ENSMUST00000118118 (Ensembl)
rat	Spart	RGD:1305900 (Rat Genome Database) 295053 (Entrez Gene) Spart (Alliance of Genome Resources)	Chr2 q26			NP_001099903 (RefSeq) NM_001106433 (RefSeq)
zebrafish	sparta	ZDB-GENE-080204-37 (Zebrafish Model Organism Database) 100005765 (Entrez Gene) sparta (Alliance of Genome Resources)	Chr10			NP_001107130 (RefSeq) NM_001113658 (RefSeq)
	spartb	ZDB-GENE-060825-146 (Zebrafish Model Organism Database) 751741 (Entrez Gene) spartb (Alliance of Genome Resources)	Chr15			NP_001038916 (RefSeq) NM_001045451 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.