Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TMEM106C	HGNC:28775 (HGNC) 79022 (Entrez Gene) TMEM106C (Alliance of Genome Resources)	Chr12 q13.11	Chr12:47963569-47968878 (+) GRCh38		Q9BVX2 (UniProt | EBI) NM_001143842 (RefSeq)
mouse	Tmem106c	MGI:1196384 (MGI) 380967 (Entrez Gene) Gene Tree Tmem106c (Alliance of Genome Resources)	Chr15 53.96 cM	Chr15:97862081-97868156 (+) GRCm39		ENSMUSG00000052369 (Ensembl Gene Model) ENSMUSP00000154819 (Ensembl) ENSMUST00000229428 (Ensembl)
rat	Tmem106c	RGD:1311532 (Rat Genome Database) 315286 (Entrez Gene) Tmem106c (Alliance of Genome Resources)	Chr7 q36			Q5RJK0 (UniProt | EBI) NM_001008358 (RefSeq)
zebrafish	tmem106c	ZDB-GENE-061013-562 (Zebrafish Model Organism Database) 768153 (Entrez Gene) tmem106c (Alliance of Genome Resources)	Chr3			NP_001070764 (RefSeq) NM_001077296 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.