Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PTCHD1	HGNC:26392 (HGNC) 139411 (Entrez Gene) 300828 (OMIM) PTCHD1 (Alliance of Genome Resources)	ChrX p22.11	ChrX:23334396-23404374 (+) GRCh38	autistic disorder	Q96NR3 (UniProt | EBI) NM_173495 (RefSeq)
mouse	Ptchd1	MGI:2685233 (MGI) 211612 (Entrez Gene) Gene Tree Ptchd1 (Alliance of Genome Resources)	ChrX 72.38 cM	ChrX:154356451-154406810 (-) GRCm39	attention deficit hyperactivity disorder	ENSMUSG00000041552 (Ensembl Gene Model) ENSMUSP00000039443 (Ensembl) ENSMUST00000038665 (Ensembl)
rat	Ptchd1	RGD:1564527 (Rat Genome Database) 317517 (Entrez Gene) Ptchd1 (Alliance of Genome Resources)	ChrX q21			NP_001178663 (RefSeq) NM_001191734 (RefSeq)
zebrafish	ptchd1	ZDB-GENE-061220-1 (Zebrafish Model Organism Database) 562268 (Entrez Gene) ptchd1 (Alliance of Genome Resources)	Chr24			XP_690754 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.