Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	C1orf116	HGNC:28667 (HGNC) 79098 (Entrez Gene) 611680 (OMIM) C1orf116 (Alliance of Genome Resources)	Chr1 q32.1	Chr1:207018522-207032756 (-) GRCh38		Q9BW04 (UniProt | EBI) NM_001083924 (RefSeq)
mouse	AA986860	MGI:2138143 (MGI) 212439 (Entrez Gene) Gene Tree AA986860 (Alliance of Genome Resources)	Chr1 56.89 cM	Chr1:130659713-130672359 (+) GRCm39		ENSMUSG00000042510 (Ensembl Gene Model) ENSMUSP00000046172 (Ensembl) ENSMUST00000039323 (Ensembl)
rat	C13h1orf116	RGD:1565034 (Rat Genome Database) 498222 (Entrez Gene) C13h1orf116 (Alliance of Genome Resources)	Chr13 q13			Q499V8 (UniProt | EBI) NM_001429732 (RefSeq)
zebrafish	zgc:158258	ZDB-GENE-070112-2272 (Zebrafish Model Organism Database) 791186 (Entrez Gene) zgc:158258 (Alliance of Genome Resources)	Chr11			NP_001074137 (RefSeq) NM_001080668 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.