Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	H4C5	HGNC:4790 (HGNC) 8367 (Entrez Gene) 602830 (OMIM) H4C5 (Alliance of Genome Resources)	Chr6 p22.2	Chr6:26204610-26205021 (+) GRCh38		P62805 (UniProt | EBI) NM_003545 (RefSeq)
	H4C14	HGNC:4794 (HGNC) 8370 (Entrez Gene) 142750 (OMIM) H4C14 (Alliance of Genome Resources)	Chr1 q21.2	Chr1:149832657-149839767 (+) GRCh38		P62805 (UniProt | EBI) NM_003548 (RefSeq)
mouse	H4c2	MGI:2448420 (MGI) 326620 (Entrez Gene) Gene Tree H4c2 (Alliance of Genome Resources)	Chr13 9.91 cM	Chr13:23940996-23941392 (+) GRCm39		ENSMUSG00000069266 (Ensembl Gene Model) ENSMUSP00000100030 (Ensembl) ENSMUST00000102965 (Ensembl)
rat	H4c14	RGD:1307448 (Rat Genome Database) 295277 (Entrez Gene) H4c14 (Alliance of Genome Resources)	Chr2 q34			P62804 (UniProt | EBI) NM_001123469 (RefSeq)
	Hist1h2ao	RGD:1304905 (Rat Genome Database) 364723 (Entrez Gene) Hist1h2ao (Alliance of Genome Resources)	Chr17 p11			NP_001395688 (RefSeq) NM_001408759 (RefSeq)
	Hist1h4b	RGD:620814 (Rat Genome Database) 64627 (Entrez Gene) Hist1h4b (Alliance of Genome Resources)	Chr17 p11			P62804 (UniProt | EBI) NM_022686 (RefSeq)
	Hist1h4m	RGD:1306905 (Rat Genome Database) 291152 (Entrez Gene) Hist1h4m (Alliance of Genome Resources)	Chr17 p11			P62804 (UniProt | EBI) NM_001271221 (RefSeq)
zebrafish	hist1h4l	ZDB-GENE-070927-10 (Zebrafish Model Organism Database) 100126027 (Entrez Gene) hist1h4l (Alliance of Genome Resources)	Chr25			NP_001099176 (RefSeq) NM_001105706 (RefSeq)
	si:ch73-36p18.4	ZDB-GENE-131127-177 (Zebrafish Model Organism Database) 101886781 (Entrez Gene) si:ch73-36p18.4 (Alliance of Genome Resources)	Chr25			XP_017209642 (RefSeq)
	si:ch211-113a14.6	ZDB-GENE-121214-170 (Zebrafish Model Organism Database) 101882398 (Entrez Gene) si:ch211-113a14.6 (Alliance of Genome Resources)	Chr25			XP_005163249 (RefSeq)
	si:ch211-113a14.17	ZDB-GENE-121214-187 (Zebrafish Model Organism Database) 560380 (Entrez Gene) si:ch211-113a14.17 (Alliance of Genome Resources)	Chr25			XP_688877 (RefSeq)
	si:dkey-23a13.7	ZDB-GENE-160113-88 (Zebrafish Model Organism Database) 100004171 (Entrez Gene) si:dkey-23a13.7 (Alliance of Genome Resources)	Chr7			XP_009301164 (RefSeq)
	si:dkey-108k21.12	ZDB-GENE-131127-139 (Zebrafish Model Organism Database) 100333562 (Entrez Gene) si:dkey-108k21.12 (Alliance of Genome Resources)	Chr25			NP_001373604 (RefSeq) NM_001386675 (RefSeq)
	si:dkey-108k21.18	ZDB-GENE-131121-139 (Zebrafish Model Organism Database) 103908712 (Entrez Gene) si:dkey-108k21.18 (Alliance of Genome Resources)	Chr25
	si:dkey-108k21.28	ZDB-GENE-131121-158 (Zebrafish Model Organism Database) 100332668 (Entrez Gene) si:dkey-108k21.28 (Alliance of Genome Resources)	Chr25			XP_002666964 (RefSeq)
	zgc:163040	ZDB-GENE-070424-79 (Zebrafish Model Organism Database) 100038789 (Entrez Gene) zgc:163040 (Alliance of Genome Resources)	Chr7			NP_001083038 (RefSeq) NM_001089569 (RefSeq)
	zgc:165555	ZDB-GENE-070620-17 (Zebrafish Model Organism Database) 100004395 (Entrez Gene) zgc:165555 (Alliance of Genome Resources)	Chr25			NP_001092231 (RefSeq) NM_001098761 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.