Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CDK5RAP1	HGNC:15880 (HGNC) 51654 (Entrez Gene) 608200 (OMIM) CDK5RAP1 (Alliance of Genome Resources)	Chr20 q11.21	Chr20:33358839-33401569 (-) GRCh38		Q96SZ6 (UniProt | EBI) NM_001365728 (RefSeq)
mouse	Cdk5rap1	MGI:1914221 (MGI) 66971 (Entrez Gene) Gene Tree Cdk5rap1 (Alliance of Genome Resources)	Chr2 76.46 cM	Chr2:154177300-154214930 (-) GRCm39		ENSMUSG00000027487 (Ensembl Gene Model) ENSMUSP00000105353 (Ensembl) ENSMUST00000109731 (Ensembl)
rat	Cdk5rap1	RGD:708387 (Rat Genome Database) 252827 (Entrez Gene) Cdk5rap1 (Alliance of Genome Resources)	Chr3 q41			Q9JLH6 (UniProt | EBI) NM_145721 (RefSeq)
zebrafish	cdk5rap1	ZDB-GENE-070424-90 (Zebrafish Model Organism Database) 558659 (Entrez Gene) cdk5rap1 (Alliance of Genome Resources)	Chr11			NP_001103849 (RefSeq) NM_001110379 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.