Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	COL6A1	HGNC:2211 (HGNC) 1291 (Entrez Gene) 120220 (OMIM) COL6A1 (Alliance of Genome Resources)	Chr21 q22.3	Chr21:45981770-46005050 (+) GRCh38	Bethlem myopathy Ullrich congenital muscular dystrophy 1A	P12109 (UniProt | EBI) NM_001848 (RefSeq)
mouse	Col6a1	MGI:88459 (MGI) 12833 (Entrez Gene) Gene Tree Col6a1 (Alliance of Genome Resources)	Chr10 39.71 cM	Chr10:76544626-76561869 (-) GRCm39	Bethlem myopathy Ullrich congenital muscular dystrophy	12833 (NCBI Gene Model) Q04857 (UniProt | EBI) NM_009933 (RefSeq)
rat	Col6a1	RGD:1565398 (Rat Genome Database) 294337 (Entrez Gene) Col6a1 (Alliance of Genome Resources)	Chr20 p12			NP_001414192 (RefSeq) NM_001427263 (RefSeq)
zebrafish	col6a1	ZDB-GENE-070501-6 (Zebrafish Model Organism Database) 569755 (Entrez Gene) col6a1 (Alliance of Genome Resources)	Chr11			XP_068080339 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.