Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	Or10j27	MGI:3031242 (MGI) 258759 (Entrez Gene) Gene Tree Or10j27 (Alliance of Genome Resources)	Chr1 80.33 cM	Chr1:172957767-172964901 (-) GRCm39		258759 (NCBI Gene Model) NP_666975 (RefSeq) NM_146764 (RefSeq)
rat	Or10j27	RGD:1332648 (Rat Genome Database) 289239 (Entrez Gene) Or10j27 (Alliance of Genome Resources)	Chr13 q24			NP_001000078 (RefSeq) NM_001000078 (RefSeq)
zebrafish	or42a9	ZDB-GENE-070806-75 (Zebrafish Model Organism Database) 100148707 (Entrez Gene) or42a9 (Alliance of Genome Resources)	Chr10			XP_017213566 (RefSeq)
	or42b2	ZDB-GENE-990415-193 (Zebrafish Model Organism Database) 30358 (Entrez Gene) or42b2 (Alliance of Genome Resources)	Chr10			NP_571206 (RefSeq) NM_131131 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.