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Vertebrate Homology
Source
 Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)		 Associated Human Diseases Sequences
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human H3C1 HGNC:4766 (HGNC)
8350 (Entrez Gene)
602810 (OMIM)
H3C1 (Alliance of Genome Resources)
 Chr6 p22.2 Chr6:26020451-26020958 (+)
GRCh38 		P68431 (UniProt | EBI)
NM_003529 (RefSeq)
H3C2 HGNC:4776 (HGNC)
8358 (Entrez Gene)
602819 (OMIM)
H3C2 (Alliance of Genome Resources)
 Chr6 p22.2 Chr6:26031589-26032099 (-)
GRCh38 		P68431 (UniProt | EBI)
NM_003537 (RefSeq)
H3C3 HGNC:4768 (HGNC)
8352 (Entrez Gene)
602812 (OMIM)
H3C3 (Alliance of Genome Resources)
 Chr6 p22.2 Chr6:26045384-26045869 (+)
GRCh38 		P68431 (UniProt | EBI)
NM_003531 (RefSeq)
H3C6 HGNC:4769 (HGNC)
8353 (Entrez Gene)
602813 (OMIM)
H3C6 (Alliance of Genome Resources)
 Chr6 p22.2 Chr6:26224178-26227473 (+)
GRCh38 		P68431 (UniProt | EBI)
NM_003532 (RefSeq)
H3C8 HGNC:4772 (HGNC)
8355 (Entrez Gene)
602815 (OMIM)
H3C8 (Alliance of Genome Resources)
 Chr6 p22.2 Chr6:26270918-26271413 (-)
GRCh38 		P68431 (UniProt | EBI)
NM_003534 (RefSeq)
H3C10 HGNC:4775 (HGNC)
8357 (Entrez Gene)
602818 (OMIM)
H3C10 (Alliance of Genome Resources)
 Chr6 p22.1 Chr6:27810051-27811300 (+)
GRCh38 		P68431 (UniProt | EBI)
NM_003536 (RefSeq)
H3C11 HGNC:4771 (HGNC)
8354 (Entrez Gene)
602814 (OMIM)
H3C11 (Alliance of Genome Resources)
 Chr6 p22.1 Chr6:27871845-27872346 (-)
GRCh38 		P68431 (UniProt | EBI)
NM_003533 (RefSeq)
mouse H3c10 MGI:2448349 (MGI)
319152 (Entrez Gene)
Gene Tree
H3c10 (Alliance of Genome Resources)
 Chr13 7.94 cM Chr13:21901829-21902239 (+)
GRCm39 		ENSMUSG00000101355 (Ensembl Gene Model)
ENSMUSP00000140394 (Ensembl)
ENSMUST00000188775 (Ensembl)
rat H3c1 RGD:1598076 (Rat Genome Database)
679994 (Entrez Gene)
H3c1 (Alliance of Genome Resources)
 Chr17 p11 NP_001395691 (RefSeq)
NM_001408762 (RefSeq)
Hist1h2ail1 RGD:1311554 (Rat Genome Database)
291159 (Entrez Gene)
Hist1h2ail1 (Alliance of Genome Resources)
 Chr17 p11 Q6LED0 (UniProt | EBI)
NM_001013056 (RefSeq)
Hist1h3b RGD:1591702 (Rat Genome Database)
680498 (Entrez Gene)
Hist1h3b (Alliance of Genome Resources)
 Chr17 p11 NP_001395694 (RefSeq)
NM_001408765 (RefSeq)
zebrafish si:ch211-113a14.27 ZDB-GENE-121214-143 (Zebrafish Model Organism Database)
103909889 (Entrez Gene)
si:ch211-113a14.27 (Alliance of Genome Resources)
 Chr25 XP_068073691 (RefSeq)
si:ch1073-153i20.2 ZDB-GENE-160113-117 (Zebrafish Model Organism Database)
103911341 (Entrez Gene)
si:ch1073-153i20.2 (Alliance of Genome Resources)
 Chr7 XP_009301184 (RefSeq)
zgc:173552 ZDB-GENE-080220-24 (Zebrafish Model Organism Database)
794406 (Entrez Gene)
zgc:173552 (Alliance of Genome Resources)
 Chr25 NP_001104686 (RefSeq)
NM_001111216 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory