Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PDCD1LG2	HGNC:18731 (HGNC) 80380 (Entrez Gene) 605723 (OMIM) PDCD1LG2 (Alliance of Genome Resources)	Chr9 p24.1	Chr9:5510531-5571282 (+) GRCh38		Q9BQ51 (UniProt | EBI) NM_025239 (RefSeq)
mouse	Pdcd1lg2	MGI:1930125 (MGI) 58205 (Entrez Gene) Gene Tree Pdcd1lg2 (Alliance of Genome Resources)	Chr19 23.93 cM	Chr19:29388319-29448561 (+) GRCm39		ENSMUSG00000016498 (Ensembl Gene Model) ENSMUSP00000158422 (Ensembl) ENSMUST00000235164 (Ensembl)
rat	Pdcd1lg2	RGD:1306403 (Rat Genome Database) 309304 (Entrez Gene) Pdcd1lg2 (Alliance of Genome Resources)	Chr1 q52			NP_001101052 (RefSeq) NM_001107582 (RefSeq)
zebrafish	si:ch211-241b2.5	ZDB-GENE-081104-192 (Zebrafish Model Organism Database) 100536137 (Entrez Gene) si:ch211-241b2.5 (Alliance of Genome Resources)	Chr21			XP_068072053 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.