Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	HCAR1	HGNC:4532 (HGNC) 27198 (Entrez Gene) 606923 (OMIM) HCAR1 (Alliance of Genome Resources)	Chr12 q24.31	Chr12:122726076-122730844 (-) GRCh38		Q9BXC0 (UniProt | EBI) NM_032554 (RefSeq)
mouse	Hcar1	MGI:2441671 (MGI) 243270 (Entrez Gene) Gene Tree Hcar1 (Alliance of Genome Resources)	Chr5 63.24 cM	Chr5:124014802-124018066 (-) GRCm39		243270 (NCBI Gene Model) Q8C131 (UniProt | EBI) NM_175520 (RefSeq)
rat	Hcar1	RGD:1586364 (Rat Genome Database) 689936 (Entrez Gene) Hcar1 (Alliance of Genome Resources)	Chr12 q15			NP_001138806 (RefSeq) NM_001145334 (RefSeq)
zebrafish	hcar1-3	ZDB-GENE-081107-48 (Zebrafish Model Organism Database) 100148539 (Entrez Gene) hcar1-3 (Alliance of Genome Resources)	Chr13			XP_068069104 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.