Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	LSAMP	HGNC:6705 (HGNC) 4045 (Entrez Gene) 603241 (OMIM) LSAMP (Alliance of Genome Resources)	Chr3 q13.31	Chr3:115802374-117139389 (-) GRCh38		Q13449 (UniProt | EBI) NM_002338 (RefSeq)
mouse	Lsamp	MGI:1261760 (MGI) 268890 (Entrez Gene) Gene Tree Lsamp (Alliance of Genome Resources)	Chr16 28.26 cM	Chr16:39804723-42002042 (+) GRCm39		ENSMUSG00000061080 (Ensembl Gene Model) ENSMUSP00000139667 (Ensembl) ENSMUST00000187695 (Ensembl)
rat	Lsamp	RGD:71102 (Rat Genome Database) 29561 (Entrez Gene) Lsamp (Alliance of Genome Resources)	Chr11 q21			Q62813 (UniProt | EBI) NM_017242 (RefSeq)
zebrafish	lsamp	ZDB-GENE-090108-1 (Zebrafish Model Organism Database) 664692 (Entrez Gene) lsamp (Alliance of Genome Resources)	Chr15			NP_001034921 (RefSeq) NM_001039832 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.