Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	LSP1	HGNC:6707 (HGNC) 4046 (Entrez Gene) 153432 (OMIM) LSP1 (Alliance of Genome Resources)	Chr11 p15.5	Chr11:1850904-1892267 (+) GRCh38		P33241 (UniProt | EBI) NM_002339 (RefSeq)
mouse	Lsp1	MGI:96832 (MGI) 16985 (Entrez Gene) Gene Tree Lsp1 (Alliance of Genome Resources)	Chr7 87.93 cM	Chr7:142014583-142048605 (+) GRCm39		16985 (NCBI Gene Model) P19973 (UniProt | EBI) NM_019391 (RefSeq)
rat	Lsp1	RGD:1306133 (Rat Genome Database) 361680 (Entrez Gene) Lsp1 (Alliance of Genome Resources)	Chr1 q41			NP_001402918 (RefSeq) NM_001415989 (RefSeq)
zebrafish	lsp1a	ZDB-GENE-131127-171 (Zebrafish Model Organism Database) 100536902 (Entrez Gene) lsp1a (Alliance of Genome Resources)	Chr25			XP_003201508 (RefSeq)
	lsp1b	ZDB-GENE-141222-12 (Zebrafish Model Organism Database) 100002400 (Entrez Gene) lsp1b (Alliance of Genome Resources)	Chr7			NP_001410762 (RefSeq) NM_001423833 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.