Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SLC46A3	HGNC:27501 (HGNC) 283537 (Entrez Gene) 616764 (OMIM) SLC46A3 (Alliance of Genome Resources)	Chr13 q12.3	Chr13:28700064-28718970 (-) GRCh38		Q7Z3Q1 (UniProt | EBI) NM_181785 (RefSeq)
mouse	Slc46a3	MGI:1918956 (MGI) 71706 (Entrez Gene) Gene Tree Slc46a3 (Alliance of Genome Resources)	Chr5 87.58 cM	Chr5:147815247-147831625 (-) GRCm39		ENSMUSG00000029650 (Ensembl Gene Model) ENSMUSP00000113879 (Ensembl) ENSMUST00000118527 (Ensembl)
rat	Slc46a3	RGD:1307594 (Rat Genome Database) 288454 (Entrez Gene) Slc46a3 (Alliance of Genome Resources)	Chr12 p11			Q5BK75 (UniProt | EBI) NM_001024968 (RefSeq)
zebrafish	si:dkey-5g14.1	ZDB-GENE-091204-361 (Zebrafish Model Organism Database) 556497 (Entrez Gene) si:dkey-5g14.1 (Alliance of Genome Resources)	Chr10			XP_684413 (RefSeq)
	slc46a3	ZDB-GENE-100105-2 (Zebrafish Model Organism Database) 556282 (Entrez Gene) slc46a3 (Alliance of Genome Resources)	Chr10			XP_009303566 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.