Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SHROOM1	HGNC:24084 (HGNC) 134549 (Entrez Gene) 611179 (OMIM) SHROOM1 (Alliance of Genome Resources)	Chr5 q31.1	Chr5:132822141-132830659 (-) GRCh38		Q2M3G4 (UniProt | EBI) NM_133456 (RefSeq)
mouse	Shroom1	MGI:1919024 (MGI) 71774 (Entrez Gene) Gene Tree Shroom1 (Alliance of Genome Resources)	Chr11 31.95 cM	Chr11:53348032-53358593 (+) GRCm39		ENSMUSG00000018387 (Ensembl Gene Model) ENSMUSP00000104641 (Ensembl) ENSMUST00000109013 (Ensembl)
rat	Shroom1	RGD:1308066 (Rat Genome Database) 287285 (Entrez Gene) Shroom1 (Alliance of Genome Resources)	Chr10 q22			XP_006246429 (RefSeq)
zebrafish	shroom1	ZDB-GENE-091204-385 (Zebrafish Model Organism Database) 559364 (Entrez Gene) shroom1 (Alliance of Genome Resources)	Chr21			XP_687790 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.