Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CCDC88A	HGNC:25523 (HGNC) 55704 (Entrez Gene) 609736 (OMIM) CCDC88A (Alliance of Genome Resources)	Chr2 p16.1	Chr2:55287842-55419895 (-) GRCh38		Q3V6T2 (UniProt | EBI) NM_001254943 (RefSeq)
mouse	Ccdc88a	MGI:1925177 (MGI) 108686 (Entrez Gene) Gene Tree Ccdc88a (Alliance of Genome Resources)	Chr11 16.61 cM	Chr11:29323658-29460808 (+) GRCm39		ENSMUSG00000032740 (Ensembl Gene Model) ENSMUSP00000159356 (Ensembl) ENSMUST00000239407 (Ensembl)
rat	Ccdc88a	RGD:1306694 (Rat Genome Database) 305605 (Entrez Gene) Ccdc88a (Alliance of Genome Resources)	Chr14 q22			NP_001414725 (RefSeq) NM_001427796 (RefSeq)
zebrafish	ccdc88aa	ZDB-GENE-100701-2 (Zebrafish Model Organism Database) 100329473 (Entrez Gene) ccdc88aa (Alliance of Genome Resources)	Chr6			XP_009300411 (RefSeq)
	ccdc88ab	ZDB-GENE-100701-3 (Zebrafish Model Organism Database) 100498671 (Entrez Gene) ccdc88ab (Alliance of Genome Resources)	ChrUN			XP_017209909 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.