Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CD44	HGNC:1681 (HGNC) 960 (Entrez Gene) 107269 (OMIM) CD44 (Alliance of Genome Resources)	Chr11 p13	Chr11:35138882-35232402 (+) GRCh38	breast ductal carcinoma colorectal adenocarcinoma gastric adenocarcinoma invasive lobular carcinoma prostate cancer transitional cell carcinoma	P16070 (UniProt | EBI) NM_001202555 (RefSeq)
mouse	Cd44	MGI:88338 (MGI) 12505 (Entrez Gene) Gene Tree Cd44 (Alliance of Genome Resources)	Chr2 54.13 cM	Chr2:102641486-102732010 (-) GRCm39		ENSMUSG00000005087 (Ensembl Gene Model) ENSMUSP00000005218 (Ensembl) ENSMUST00000005218 (Ensembl)
rat	Cd44	RGD:2307 (Rat Genome Database) 25406 (Entrez Gene) Cd44 (Alliance of Genome Resources)	Chr3 q32			P26051 (UniProt | EBI) NM_012924 (RefSeq)
zebrafish	cd44a	ZDB-GENE-110429-1 (Zebrafish Model Organism Database) 797357 (Entrez Gene) cd44a (Alliance of Genome Resources)	Chr7			XP_001922491 (RefSeq)
	cd44b	ZDB-GENE-110429-2 (Zebrafish Model Organism Database) 100330801 (Entrez Gene) cd44b (Alliance of Genome Resources)	Chr25			XP_017209790 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.