Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SYCE1	HGNC:28852 (HGNC) 93426 (Entrez Gene) 611486 (OMIM) SYCE1 (Alliance of Genome Resources)	Chr10 q26.3	Chr10:133553899-133569835 (-) GRCh38	primary ovarian insufficiency 12 spermatogenic failure 15	Q8N0S2 (UniProt | EBI) NM_001143764 (RefSeq)
mouse	Syce1	MGI:1921325 (MGI) 74075 (Entrez Gene) Gene Tree Syce1 (Alliance of Genome Resources)	Chr7 85.96 cM	Chr7:140357142-140367765 (-) GRCm39	primary ovarian insufficiency 12	ENSMUSG00000025480 (Ensembl Gene Model) ENSMUSP00000026553 (Ensembl) ENSMUST00000026553 (Ensembl)
rat	Syce1	RGD:1559853 (Rat Genome Database) 502372 (Entrez Gene) Syce1 (Alliance of Genome Resources)	Chr1 q41			Q5XHZ2 (UniProt | EBI) NM_001025058 (RefSeq)
zebrafish	si:ch211-199g17.9	ZDB-GENE-120214-17 (Zebrafish Model Organism Database) 108180085 (Entrez Gene) si:ch211-199g17.9 (Alliance of Genome Resources)	Chr19			NP_001315633 (RefSeq) NM_001328704 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.