Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PTX4	HGNC:14171 (HGNC) 390667 (Entrez Gene) 613442 (OMIM) PTX4 (Alliance of Genome Resources)	Chr16 p13.3	Chr16:1485886-1488981 (-) GRCh38		Q96A99 (UniProt | EBI) NM_001013658 (RefSeq)
mouse	Ptx4	MGI:1915759 (MGI) 68509 (Entrez Gene) Gene Tree Ptx4 (Alliance of Genome Resources)	Chr17 12.53 cM	Chr17:25339734-25344266 (+) GRCm39		ENSMUSG00000044172 (Ensembl Gene Model) ENSMUSP00000055984 (Ensembl) ENSMUST00000054930 (Ensembl)
rat	Ptx4	RGD:1311190 (Rat Genome Database) 287130 (Entrez Gene) Ptx4 (Alliance of Genome Resources)	Chr10 q12			XP_220237 (RefSeq)
zebrafish	ptx4	ZDB-GENE-120215-70 (Zebrafish Model Organism Database) 110437772 (Entrez Gene) ptx4 (Alliance of Genome Resources)	Chr3			XP_021329556 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.