Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	H2AC4	HGNC:4734 (HGNC) 8335 (Entrez Gene) 602795 (OMIM) H2AC4 (Alliance of Genome Resources)	Chr6 p22.2	Chr6:26033092-26033618 (-) GRCh38		P04908 (UniProt | EBI) NM_003513 (RefSeq)
	H2AC8	HGNC:4724 (HGNC) 3012 (Entrez Gene) 602786 (OMIM) H2AC8 (Alliance of Genome Resources)	Chr6 p22.2	Chr6:26216921-26217437 (+) GRCh38		P04908 (UniProt | EBI) NM_021052 (RefSeq)
	H2AC11	HGNC:4737 (HGNC) 8969 (Entrez Gene) 615012 (OMIM) H2AC11 (Alliance of Genome Resources)	Chr6 p22.1	Chr6:27133043-27133535 (+) GRCh38		P0C0S8 (UniProt | EBI) NM_021064 (RefSeq)
mouse	H2ac22	MGI:2448300 (MGI) 319170 (Entrez Gene) Gene Tree H2ac22 (Alliance of Genome Resources)	Chr13 7.97 cM	Chr13:21970996-21971388 (-) GRCm39		ENSMUSG00000069309 (Ensembl Gene Model) ENSMUSP00000089345 (Ensembl) ENSMUST00000091751 (Ensembl)
rat	H2ac4	RGD:1589461 (Rat Genome Database) 680615 (Entrez Gene) H2ac4 (Alliance of Genome Resources)	Chr17 p11			NP_001102893 (RefSeq) NM_001109423 (RefSeq)
	H2ac23	RGD:1586722 (Rat Genome Database) 684773 (Entrez Gene) H2ac23 (Alliance of Genome Resources)	Chr17			NP_001395861 (RefSeq) NM_001408932 (RefSeq)
	Hist1h2ac	RGD:1597155 (Rat Genome Database) 306962 (Entrez Gene) Hist1h2ac (Alliance of Genome Resources)	Chr17 p11			NP_001395680 (RefSeq) NM_001408751 (RefSeq)
	Hist1h2af	RGD:1564767 (Rat Genome Database) 498753 (Entrez Gene) Hist1h2af (Alliance of Genome Resources)	Chr17 p11			NP_001019453 (RefSeq) NM_001024282 (RefSeq)
	Hist1h2ai	RGD:2321504 (Rat Genome Database) 100360754 (Entrez Gene) Hist1h2ai (Alliance of Genome Resources)	Chr17			NP_001395599 (RefSeq) NM_001408670 (RefSeq)
	hist1h2ail2	RGD:1562827 (Rat Genome Database) 502129 (Entrez Gene) hist1h2ail2 (Alliance of Genome Resources)	Chr17 p11			NP_001395690 (RefSeq) NM_001408761 (RefSeq)
	Hist1h2an	RGD:1309078 (Rat Genome Database) 306970 (Entrez Gene) Hist1h2an (Alliance of Genome Resources)	Chr17 p11			NP_001100824 (RefSeq) NM_001107354 (RefSeq)
	LOC100910554	RGD:6497956 (Rat Genome Database) 100910554 (Entrez Gene) LOC100910554 (Alliance of Genome Resources)	Chr17			XP_003751759 (RefSeq)
zebrafish	si:ch211-113a14.19	ZDB-GENE-121214-198 (Zebrafish Model Organism Database) 560527 (Entrez Gene) si:ch211-113a14.19 (Alliance of Genome Resources)	Chr25
	si:ch211-113a14.25	ZDB-GENE-121214-152 (Zebrafish Model Organism Database) 561187 (Entrez Gene) si:ch211-113a14.25 (Alliance of Genome Resources)	Chr25			XP_009296490 (RefSeq)
	si:dkey-261m9.11	ZDB-GENE-131127-102 (Zebrafish Model Organism Database) 563177 (Entrez Gene) si:dkey-261m9.11 (Alliance of Genome Resources)	Chr25			XP_009296467 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.