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Vertebrate Homology
Source
Alliance of Genome Resources

 
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRAV8-1 HGNC:12146 (HGNC)
28685 (Entrez Gene)
TRAV8-1 (Alliance of Genome Resources)
Chr14 q11.2 Chr14:21797287-21797886 (+)
GRCh38
A0A0A6YYK1 (UniProt | EBI)
TRAV8-3 HGNC:12148 (HGNC)
28683 (Entrez Gene)
TRAV8-3 (Alliance of Genome Resources)
Chr14 q11.2 Chr14:21852558-21853006 (+)
GRCh38
A0A0A6YYJ7 (UniProt | EBI)
mouse Trav9d-4 MGI:4889087 (MGI)
667574 (Entrez Gene)
Gene Tree
Trav9d-4 (Alliance of Genome Resources)
Chr14 27.17 cM Chr14:53220913-53221227 (+)
GRCm39
667574 (NCBI Gene Model)
A0A0G2JG37 (UniProt | EBI)
BC139214 (GenBank | ENA | DDBJ)
rat LOC688340 RGD:11446160 (Rat Genome Database)
688340 (Entrez Gene)
LOC688340 (Alliance of Genome Resources)
Chr15
zebrafish tradv1 ZDB-GENE-170601-119 (Zebrafish Model Organism Database)
368966 (Entrez Gene)
tradv1 (Alliance of Genome Resources)
Chr2
tradv2.0.1 ZDB-GENE-170601-120 (Zebrafish Model Organism Database)
368965 (Entrez Gene)
tradv2.0.1 (Alliance of Genome Resources)
Chr2
tradv2.0.3 ZDB-GENE-170601-122 (Zebrafish Model Organism Database)
368957 (Entrez Gene)
tradv2.0.3 (Alliance of Genome Resources)
Chr2
tradv15.0 ZDB-GENE-170601-153 (Zebrafish Model Organism Database)
368553 (Entrez Gene)
tradv15.0 (Alliance of Genome Resources)
Chr2
tradv19.0 ZDB-GENE-170601-157 (Zebrafish Model Organism Database)
368549 (Entrez Gene)
tradv19.0 (Alliance of Genome Resources)
Chr2
tradv20.0 ZDB-GENE-170601-158 (Zebrafish Model Organism Database)
368548 (Entrez Gene)
tradv20.0 (Alliance of Genome Resources)
Chr2
tradv24.0.2 ZDB-GENE-141212-67 (Zebrafish Model Organism Database)
368541 (Entrez Gene)
tradv24.0.2 (Alliance of Genome Resources)
Chr2
tradv24.0.3 ZDB-GENE-141212-49 (Zebrafish Model Organism Database)
368538 (Entrez Gene)
tradv24.0.3 (Alliance of Genome Resources)
Chr2
tradv24.0.4 ZDB-GENE-141212-44 (Zebrafish Model Organism Database)
368447 (Entrez Gene)
tradv24.0.4 (Alliance of Genome Resources)
Chr2
tradv24.0.5 ZDB-GENE-141212-35 (Zebrafish Model Organism Database)
368445 (Entrez Gene)
tradv24.0.5 (Alliance of Genome Resources)
Chr2
tradv25.0.1 ZDB-GENE-141212-24 (Zebrafish Model Organism Database)
368540 (Entrez Gene)
tradv25.0.1 (Alliance of Genome Resources)
Chr2
tradv25.0.2 ZDB-GENE-141212-40 (Zebrafish Model Organism Database)
368537 (Entrez Gene)
tradv25.0.2 (Alliance of Genome Resources)
Chr2
tradv25.0.3 ZDB-GENE-141212-30 (Zebrafish Model Organism Database)
368446 (Entrez Gene)
tradv25.0.3 (Alliance of Genome Resources)
Chr2
tradv25.0.4 ZDB-GENE-141212-52 (Zebrafish Model Organism Database)
368443 (Entrez Gene)
tradv25.0.4 (Alliance of Genome Resources)
Chr2
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory