Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	HOXC8	HGNC:5129 (HGNC) 3224 (Entrez Gene) 142970 (OMIM) HOXC8 (Alliance of Genome Resources)	Chr12 q13.13	Chr12:54008985-54012769 (+) GRCh38		P31273 (UniProt | EBI) NM_022658 (RefSeq)
mouse	Hoxc8	MGI:96198 (MGI) 15426 (Entrez Gene) Gene Tree Hoxc8 (Alliance of Genome Resources)	Chr15 58.05 cM	Chr15:102899039-102902543 (+) GRCm39		ENSMUSG00000001657 (Ensembl Gene Model) ENSMUSP00000001703 (Ensembl) ENSMUST00000001703 (Ensembl)
rat	Hoxc8	RGD:2821 (Rat Genome Database) 24460 (Entrez Gene) Hoxc8 (Alliance of Genome Resources)	Chr7 q36			P18866 (UniProt | EBI) NM_001177326 (RefSeq)
zebrafish	hoxc8a	ZDB-GENE-990415-114 (Zebrafish Model Organism Database) 449648 (Entrez Gene) hoxc8a (Alliance of Genome Resources)	Chr23			Q68EH7 (UniProt | EBI) NM_001005771 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.