Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	LDB1	HGNC:6532 (HGNC) 8861 (Entrez Gene) 603451 (OMIM) LDB1 (Alliance of Genome Resources)	Chr10 q24.32	Chr10:102102088-102121442 (-) GRCh38		Q86U70 (UniProt | EBI) NM_001113407 (RefSeq)
mouse	Ldb1	MGI:894762 (MGI) 16825 (Entrez Gene) Gene Tree Ldb1 (Alliance of Genome Resources)	Chr19 38.75 cM	Chr19:46020009-46033653 (-) GRCm39	nail-patella syndrome	ENSMUSG00000025223 (Ensembl Gene Model) ENSMUSP00000139562 (Ensembl) ENSMUST00000185355 (Ensembl)
rat	Ldb1	RGD:1310359 (Rat Genome Database) 309447 (Entrez Gene) Ldb1 (Alliance of Genome Resources)	Chr1 q54			NP_001101071 (RefSeq) NM_001107601 (RefSeq)
zebrafish	ldb1a	ZDB-GENE-990415-138 (Zebrafish Model Organism Database) 30579 (Entrez Gene) ldb1a (Alliance of Genome Resources)	Chr13			O73715 (UniProt | EBI) NM_131316 (RefSeq)
	ldb1b	ZDB-GENE-990415-135 (Zebrafish Model Organism Database) 30576 (Entrez Gene) ldb1b (Alliance of Genome Resources)	Chr11			NP_001349250 (RefSeq) NM_001362321 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.