Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SLC39A5	HGNC:20502 (HGNC) 283375 (Entrez Gene) 608730 (OMIM) SLC39A5 (Alliance of Genome Resources)	Chr12 q13.3		myopia	Q6ZMH5 (UniProt | EBI) NM_001135195 (RefSeq)
mouse	Slc39a5	MGI:1919336 (MGI) 72002 (Entrez Gene) Gene Tree Slc39a5 (Alliance of Genome Resources)	Chr10 76.55 cM	Chr10:128231800-128237098 (-) GRCm39		ENSMUSG00000039878 (Ensembl Gene Model) ENSMUSP00000037753 (Ensembl) ENSMUST00000042666 (Ensembl)
rat	Slc39a5	RGD:1310322 (Rat Genome Database) 362812 (Entrez Gene) Slc39a5 (Alliance of Genome Resources)	Chr7 q11			NP_001102198 (RefSeq) NM_001108728 (RefSeq)
zebrafish	slc39a5	ZDB-GENE-060608-1 (Zebrafish Model Organism Database) 561758 (Entrez Gene) slc39a5 (Alliance of Genome Resources)	Chr23			XP_690258 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.