Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SLC6A19	HGNC:27960 (HGNC) 340024 (Entrez Gene) 608893 (OMIM) SLC6A19 (Alliance of Genome Resources)	Chr5 p15.33	Chr5:1201595-1225111 (+) GRCh38	Hartnup disease	Q695T7 (UniProt | EBI) NM_001003841 (RefSeq)
mouse	Slc6a19	MGI:1921588 (MGI) 74338 (Entrez Gene) Gene Tree Slc6a19 (Alliance of Genome Resources)	Chr13 40.14 cM	Chr13:73827864-73848899 (-) GRCm39	Hartnup disease	74338 (NCBI Gene Model) Q9D687 (UniProt | EBI) NM_028878 (RefSeq)
rat	Slc6a19	RGD:1594328 (Rat Genome Database) 664630 (Entrez Gene) Slc6a19 (Alliance of Genome Resources)	Chr1 p11			Q2A865 (UniProt | EBI) NM_001039722 (RefSeq)
zebrafish	slc6a19a.1	ZDB-GENE-070620-2 (Zebrafish Model Organism Database) 553256 (Entrez Gene) slc6a19a.1 (Alliance of Genome Resources)	Chr19			NP_001091648 (RefSeq) NM_001098178 (RefSeq)
	slc6a19a.2	ZDB-GENE-141210-16 (Zebrafish Model Organism Database) 100334171 (Entrez Gene) slc6a19a.2 (Alliance of Genome Resources)	Chr19			XP_002665492 (RefSeq)
	slc6a19b	ZDB-GENE-030131-4755 (Zebrafish Model Organism Database) 326030 (Entrez Gene) slc6a19b (Alliance of Genome Resources)	Chr16			NP_956030 (RefSeq) NM_199736 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.