Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SNX27	HGNC:20073 (HGNC) 81609 (Entrez Gene) 611541 (OMIM) SNX27 (Alliance of Genome Resources)	Chr1 q21.3	Chr1:151612006-151699091 (+) GRCh38		Q96L92 (UniProt | EBI) NM_030918 (RefSeq)
mouse	Snx27	MGI:1923992 (MGI) 76742 (Entrez Gene) Gene Tree Snx27 (Alliance of Genome Resources)	Chr3 40.74 cM	Chr3:94404851-94490023 (-) GRCm39		ENSMUSG00000028136 (Ensembl Gene Model) ENSMUSP00000102904 (Ensembl) ENSMUST00000107283 (Ensembl)
rat	Snx27	RGD:628705 (Rat Genome Database) 260323 (Entrez Gene) Snx27 (Alliance of Genome Resources)	Chr2 q34			Q8K4V4 (UniProt | EBI) NM_152847 (RefSeq)
zebrafish	snx27a	ZDB-GENE-060503-371 (Zebrafish Model Organism Database) 566205 (Entrez Gene) snx27a (Alliance of Genome Resources)	Chr19			NP_001038565 (RefSeq) NM_001045100 (RefSeq)
	snx27b	ZDB-GENE-040426-1529 (Zebrafish Model Organism Database) 393512 (Entrez Gene) snx27b (Alliance of Genome Resources)	Chr16			NP_956834 (RefSeq) NM_200540 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.