Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TREX2	HGNC:12270 (HGNC) 11219 (Entrez Gene) 300370 (OMIM) TREX2 (Alliance of Genome Resources)	ChrX q28	ChrX:153444473-153470587 (-) GRCh38		Q9BQ50 (UniProt | EBI) NM_080699 (RefSeq)
mouse	Trex2	MGI:1346343 (MGI) 24102 (Entrez Gene) Gene Tree Trex2 (Alliance of Genome Resources)	ChrX 37.31 cM	ChrX:72477311-72478949 (-) GRCm39		24102 (NCBI Gene Model) Q9R1A9 (UniProt | EBI) NM_011907 (RefSeq)
rat	Trex2	RGD:1562245 (Rat Genome Database) 309275 (Entrez Gene) Trex2 (Alliance of Genome Resources)	ChrX			NP_001101050 (RefSeq) NM_001107580 (RefSeq)
zebrafish	plex9.1	ZDB-GENE-131127-357 (Zebrafish Model Organism Database) 101886651 (Entrez Gene) plex9.1 (Alliance of Genome Resources)	Chr25			XP_005174272 (RefSeq)
	plex9.2	ZDB-GENE-110411-9 (Zebrafish Model Organism Database) 100005742 (Entrez Gene) plex9.2 (Alliance of Genome Resources)	Chr25			NP_001373584 (RefSeq) NM_001386655 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.