Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	KDM5C	HGNC:11114 (HGNC) 8242 (Entrez Gene) 314690 (OMIM) KDM5C (Alliance of Genome Resources)	ChrX p11.22	ChrX:53176277-53225422 (-) GRCh38	descending colon cancer syndromic X-linked intellectual disability Claes-Jensen type	P41229 (UniProt | EBI) NM_001146702 (RefSeq)
mouse	Kdm5c	MGI:99781 (MGI) 20591 (Entrez Gene) Gene Tree Kdm5c (Alliance of Genome Resources)	ChrX 68.46 cM	ChrX:151016016-151057531 (+) GRCm39	syndromic X-linked intellectual disability Claes-Jensen type	ENSMUSG00000025332 (Ensembl Gene Model) ENSMUSP00000108203 (Ensembl) ENSMUST00000112584 (Ensembl)
rat	Kdm5c	RGD:1560601 (Rat Genome Database) 317432 (Entrez Gene) Kdm5c (Alliance of Genome Resources)	ChrX q13			NP_001406701 (RefSeq) NM_001419772 (RefSeq)
zebrafish	kdm5c	ZDB-GENE-060810-94 (Zebrafish Model Organism Database) 553406 (Entrez Gene) kdm5c (Alliance of Genome Resources)	Chr8			NP_001116706 (RefSeq) NM_001123234 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.