Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SOX2-OT	HGNC:20209 (HGNC) 347689 (Entrez Gene) 616338 (OMIM) SOX2-OT (Alliance of Genome Resources)	Chr3 q26.33	Chr3:180989762-181836880 (+) GRCh38
mouse	Sox2ot	MGI:2444112 (MGI) 320478 (Entrez Gene) Gene Tree Sox2ot (Alliance of Genome Resources)	Chr3 16.56 cM	Chr3:34614530-34732142 (+) GRCm39		320478 (NCBI Gene Model) NR_015580 (RefSeq)
zebrafish	sox2ot	ZDB-LNCRNAG-091125-1 (Zebrafish Model Organism Database) 103909645 (Entrez Gene) sox2ot (Alliance of Genome Resources)	Chr22

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.