Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	IGKV3-7	HGNC:5821 (HGNC) 28915 (Entrez Gene) IGKV3-7 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:88978468-88979081 (-) GRCh38		A0A075B6H7 (UniProt | EBI)
	IGKV3-11	HGNC:5815 (HGNC) 28914 (Entrez Gene) IGKV3-11 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:89027171-89027731 (-) GRCh38
	IGKV3-15	HGNC:5816 (HGNC) 28913 (Entrez Gene) IGKV3-15 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:89085177-89085787 (-) GRCh38		P01624 (UniProt | EBI)
	IGKV3-20	HGNC:5817 (HGNC) 28912 (Entrez Gene) IGKV3-20 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:89142574-89143160 (-) GRCh38		P01619 (UniProt | EBI)
	IGKV3D-7	HGNC:5829 (HGNC) 28877 (Entrez Gene) IGKV3D-7 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:90234812-90235370 (+) GRCh38		A0A0C4DH55 (UniProt | EBI)
	IGKV3D-11	HGNC:5823 (HGNC) 28876 (Entrez Gene) IGKV3D-11 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:90172802-90173414 (+) GRCh38		A0A0A0MRZ8 (UniProt | EBI)
	IGKV3D-15	HGNC:5824 (HGNC) 28875 (Entrez Gene) IGKV3D-15 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:90114838-90115402 (+) GRCh38		A0A087WSY6 (UniProt | EBI)
	IGKV3D-20	HGNC:5825 (HGNC) 28874 (Entrez Gene) IGKV3D-20 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:90038848-90039479 (+) GRCh38		A0A0C4DH25 (UniProt | EBI)
	IGKV3OR2-268	HGNC:5830 (HGNC) 3523 (Entrez Gene) IGKV3OR2-268 (Alliance of Genome Resources)	Chr2 p12	Chr2:87338511-87339035 (+) GRCh38
mouse	Igkv3-12	MGI:1330815 (MGI) 667914 (Entrez Gene) Gene Tree Igkv3-12 (Alliance of Genome Resources)	Chr6 31.95 cM	Chr6:70495234-70495833 (+) GRCm39		667914 (NCBI Gene Model) A0A140T8P0 (UniProt | EBI)
rat	Igkv2-112l2	RGD:1563231 (Rat Genome Database) 502832 (Entrez Gene) Igkv2-112l2 (Alliance of Genome Resources)	Chr4
	Igkvl11	RGD:2321310 (Rat Genome Database) 100360848 (Entrez Gene) Igkvl11 (Alliance of Genome Resources)	Chr4

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.