Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	OR1A1	HGNC:8179 (HGNC) 8383 (Entrez Gene) 618046 (OMIM) OR1A1 (Alliance of Genome Resources)	Chr17 p13.3	Chr17:3207539-3218896 (+) GRCh38		Q9P1Q5 (UniProt | EBI) NM_001386104 (RefSeq)
	OR1A2	HGNC:8180 (HGNC) 26189 (Entrez Gene) 618047 (OMIM) OR1A2 (Alliance of Genome Resources)	Chr17 p13.3	Chr17:3197519-3198448 (+) GRCh38		Q9Y585 (UniProt | EBI) NM_012352 (RefSeq)
mouse	Or1a1	MGI:3030237 (MGI) 404316 (Entrez Gene) Gene Tree Or1a1 (Alliance of Genome Resources)	Chr11 45.76 cM	Chr11:74086331-74087272 (+) GRCm39		404316 (NCBI Gene Model) NP_997505 (RefSeq) NM_207622 (RefSeq)
rat	Or1a1	RGD:1332685 (Rat Genome Database) 287513 (Entrez Gene) Or1a1 (Alliance of Genome Resources)	Chr10 q24			NP_001000035 (RefSeq) NM_001000035 (RefSeq)
	Or1a1b	RGD:1334436 (Rat Genome Database) 287514 (Entrez Gene) Or1a1b (Alliance of Genome Resources)	Chr10 q24			NP_001000036 (RefSeq) NM_001000036 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.