Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PRAMEF13	HGNC:13262 (HGNC) 400736 (Entrez Gene) PRAMEF13 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13196188-13201409 (-) GRCh38		Q5VWM6 (UniProt | EBI) NM_001291380 (RefSeq)
	PRAMEF20	HGNC:25224 (HGNC) 645425 (Entrez Gene) PRAMEF20 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13410450-13421328 (+) GRCh38		Q5VT98 (UniProt | EBI) NM_001099852 (RefSeq)
mouse	Pramel15	MGI:3712553 (MGI) 627009 (Entrez Gene) Gene Tree Pramel15 (Alliance of Genome Resources)	Chr4 77.98 cM	Chr4:144099330-144104503 (-) GRCm39		627009 (NCBI Gene Model) NP_001108549 (RefSeq) NM_001115077 (RefSeq)
rat	Pramef20	RGD:1587437 (Rat Genome Database) 691150 (Entrez Gene) Pramef20 (Alliance of Genome Resources)	Chr5 q36			NP_001421580 (RefSeq) NM_001434651 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.