Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	ZKSCAN3	HGNC:13853 (HGNC) 80317 (Entrez Gene) 612791 (OMIM) ZKSCAN3 (Alliance of Genome Resources)	Chr6 p22.1	Chr6:28349878-28369172 (+) GRCh38		Q9BRR0 (UniProt | EBI) NM_024493 (RefSeq)
	ZKSCAN4	HGNC:13854 (HGNC) 387032 (Entrez Gene) 611643 (OMIM) ZKSCAN4 (Alliance of Genome Resources)	Chr6 p22.1	Chr6:28241697-28259211 (-) GRCh38		Q969J2 (UniProt | EBI) NM_019110 (RefSeq)
mouse	Zkscan3	MGI:1919989 (MGI) 72739 (Entrez Gene) Gene Tree Zkscan3 (Alliance of Genome Resources)	Chr13 7.78 cM	Chr13:21571173-21586925 (-) GRCm39		ENSMUSG00000021327 (Ensembl Gene Model) ENSMUSP00000112135 (Ensembl) ENSMUST00000116434 (Ensembl)
rat	Zkscan3	RGD:1305753 (Rat Genome Database) 306977 (Entrez Gene) Zkscan3 (Alliance of Genome Resources)	Chr17 p11			NP_001012053 (RefSeq) NM_001012053 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.