Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	Gm21560	MGI:5434915 (MGI) 105245675 (Entrez Gene) Gene Tree Gm21560 (Alliance of Genome Resources)	Chr14 Syntenic	Chr14:16250563-16257832 (+) GRCm39		105245675 (NCBI Gene Model) D3Z7A4 (UniProt | EBI) XM_011244836 (RefSeq)
rat	Girdinl1	RGD:1591345 (Rat Genome Database) 685668 (Entrez Gene) Girdinl1 (Alliance of Genome Resources)	Chr9			XP_038940366 (RefSeq)
	MGC116197	RGD:1560404 (Rat Genome Database) 367620 (Entrez Gene) MGC116197 (Alliance of Genome Resources)	Chr9			NP_001416461 (RefSeq) NM_001025755 (RefSeq)
	Spetex2f	RGD:1359579 (Rat Genome Database) 316940 (Entrez Gene) Spetex2f (Alliance of Genome Resources)	Chr15 p14			NP_001009968 (RefSeq) NM_001009968 (RefSeq)
	Spetex2l1	RGD:1562800 (Rat Genome Database) 302192 (Entrez Gene) Spetex2l1 (Alliance of Genome Resources)	Chr9			NP_001396046 (RefSeq) NM_001409117 (RefSeq)
	Spetex2l2	RGD:2321302 (Rat Genome Database) 100360856 (Entrez Gene) Spetex2l2 (Alliance of Genome Resources)	Chr9			XP_063123892 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.