Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SLPI	HGNC:11092 (HGNC) 6590 (Entrez Gene) 107285 (OMIM) SLPI (Alliance of Genome Resources)	Chr20 q13.12	Chr20:45252239-45254564 (-) GRCh38		P03973 (UniProt | EBI) NM_003064 (RefSeq)
mouse	Slpi	MGI:109297 (MGI) 20568 (Entrez Gene) Gene Tree Slpi (Alliance of Genome Resources)	Chr2 85.16 cM	Chr2:164195990-164231015 (-) GRCm39		ENSMUSG00000017002 (Ensembl Gene Model) ENSMUSP00000104992 (Ensembl) ENSMUST00000109367 (Ensembl)
rat	Slpi	RGD:621768 (Rat Genome Database) 84386 (Entrez Gene) Slpi (Alliance of Genome Resources)	Chr3 q42			NP_445824 (RefSeq) NM_053372 (RefSeq)
	Slpi-ps1	RGD:1303102 (Rat Genome Database) 408229 (Entrez Gene) Slpi-ps1 (Alliance of Genome Resources)	Chr3 q42			NM_001008872 (RefSeq)
	Slpi-ps2	RGD:1302977 (Rat Genome Database) 408224 (Entrez Gene) Slpi-ps2 (Alliance of Genome Resources)	Chr3 q42			NM_001008873 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.