PIGR Vertebrate HGNC

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Vertebrate Homology

Source

Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
- human
- mouse
- rat
- zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 12/10/2024 MGI 6.24

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences select all deselect all Go
human	PIGR	HGNC:8968 (HGNC) 5284 (Entrez Gene) 173880 (OMIM) PIGR (Alliance of Genome Resources)	Chr1 q32.1	Chr1:206928522-206946466 (-) GRCh38		P01833 (UniProt \| EBI) NM_002644 (RefSeq)
mouse	Pigr	MGI:103080 (MGI) 18703 (Entrez Gene) Gene Tree Pigr (Alliance of Genome Resources)	Chr1 56.89 cM	Chr1:130754421-130779986 (+) GRCm39		18703 (NCBI Gene Model) O70570 (UniProt \| EBI) NM_011082 (RefSeq)
rat	Pigr	RGD:3328 (Rat Genome Database) 25046 (Entrez Gene) Pigr (Alliance of Genome Resources)	Chr13 q13			P15083 (UniProt \| EBI) NM_001429543 (RefSeq)
zebrafish	pigr	ZDB-GENE-060503-327 (Zebrafish Model Organism Database) 566471 (Entrez Gene) pigr (Alliance of Genome Resources)	Chr2			NP_001289179 (RefSeq) NM_001302250 (RefSeq)
	pigrl3.5	ZDB-GENE-150409-6 (Zebrafish Model Organism Database) 105665598 (Entrez Gene) pigrl3.5 (Alliance of Genome Resources)	Chr2			NP_001293027 (RefSeq) NM_001306098 (RefSeq)
	pigrl3.9	ZDB-GENE-150409-8 (Zebrafish Model Organism Database) 103910135 (Entrez Gene) pigrl3.9 (Alliance of Genome Resources)	Chr2			NP_001293028 (RefSeq) NM_001306099 (RefSeq)
	si:ch211-215e19.3	ZDB-GENE-060503-685 (Zebrafish Model Organism Database) 100332384 (Entrez Gene) si:ch211-215e19.3 (Alliance of Genome Resources)	Chr2			XP_002660995 (RefSeq)
	si:ch211-215e19.8	ZDB-GENE-070705-106 (Zebrafish Model Organism Database) 100001999 (Entrez Gene) si:ch211-215e19.8 (Alliance of Genome Resources)	Chr2
	si:ch211-264f5.2	ZDB-GENE-080303-2 (Zebrafish Model Organism Database) 570749 (Entrez Gene) si:ch211-264f5.2 (Alliance of Genome Resources)	Chr19			NP_001091723 (RefSeq) NM_001098253 (RefSeq)