Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PDXP	HGNC:30259 (HGNC) 57026 (Entrez Gene) 609246 (OMIM) PDXP (Alliance of Genome Resources)	Chr22 q13.1	Chr22:37658723-37666932 (+) GRCh38		Q96GD0 (UniProt | EBI) NM_020315 (RefSeq)
mouse	Pdxp	MGI:1919282 (MGI) 57028 (Entrez Gene) Gene Tree Pdxp (Alliance of Genome Resources)	Chr15 37.7 cM	Chr15:78798119-78803717 (+) GRCm39		ENSMUSG00000116165 (Ensembl Gene Model) ENSMUSP00000086796 (Ensembl) ENSMUST00000089378 (Ensembl)
rat	Pdxp	RGD:1586212 (Rat Genome Database) 727679 (Entrez Gene) Pdxp (Alliance of Genome Resources)	Chr7 q34			Q8VD52 (UniProt | EBI) NM_001135819 (RefSeq)
zebrafish	pdxp	ZDB-GENE-080723-69 (Zebrafish Model Organism Database) 561030 (Entrez Gene) pdxp (Alliance of Genome Resources)	Chr10			NP_001122177 (RefSeq) NM_001128705 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

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