Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CLPTM1L	HGNC:24308 (HGNC) 81037 (Entrez Gene) 612585 (OMIM) CLPTM1L (Alliance of Genome Resources)	Chr5 p15.33	Chr5:1317752-1345099 (-) GRCh38	esophagus squamous cell carcinoma gallbladder carcinoma hepatocellular carcinoma lung adenocarcinoma lung cancer lung non-small cell carcinoma lung squamous cell carcinoma nasopharynx carcinoma oral squamous cell carcinoma pharynx squamous cell carcinoma pulmonary emphysema	Q96KA5 (UniProt | EBI) NM_030782 (RefSeq)
mouse	Clptm1l	MGI:2442892 (MGI) 218335 (Entrez Gene) Gene Tree Clptm1l (Alliance of Genome Resources)	Chr13 40.12 cM	Chr13:73752125-73768724 (+) GRCm39		ENSMUSG00000021610 (Ensembl Gene Model) ENSMUSP00000022102 (Ensembl) ENSMUST00000022102 (Ensembl)
rat	Clptm1l	RGD:1307896 (Rat Genome Database) 316916 (Entrez Gene) Clptm1l (Alliance of Genome Resources)	Chr1 p11			NP_001101710 (RefSeq) NM_001108240 (RefSeq)
zebrafish	clptm1l	ZDB-GENE-040718-75 (Zebrafish Model Organism Database) 436653 (Entrez Gene) clptm1l (Alliance of Genome Resources)	Chr19			Q6DHU1 (UniProt | EBI) NM_001002380 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.