Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PDE6D	HGNC:8788 (HGNC) 5147 (Entrez Gene) 602676 (OMIM) PDE6D (Alliance of Genome Resources)	Chr2 q37.1	Chr2:231732433-231786272 (-) GRCh38	Joubert syndrome 22	O43924 (UniProt | EBI) NM_002601 (RefSeq)
mouse	Pde6d	MGI:1270843 (MGI) 18582 (Entrez Gene) Gene Tree Pde6d (Alliance of Genome Resources)	Chr1 43.96 cM	Chr1:86470735-86510260 (-) GRCm39		18582 (NCBI Gene Model) O55057 (UniProt | EBI) NM_001360817 (RefSeq)
rat	Pde6d	RGD:1306204 (Rat Genome Database) 363272 (Entrez Gene) Pde6d (Alliance of Genome Resources)	Chr9 q35			NP_001102276 (RefSeq) NM_001108806 (RefSeq)
zebrafish	pde6d	ZDB-GENE-040718-463 (Zebrafish Model Organism Database) 436981 (Entrez Gene) pde6d (Alliance of Genome Resources)	Chr6			NP_001002708 (RefSeq) NM_001002708 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.