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Vertebrate Homology
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Alliance of Genome Resources

 
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CT47A1 HGNC:33282 (HGNC)
728096 (Entrez Gene)
300780 (OMIM)
CT47A1 (Alliance of Genome Resources)
ChrX q24 ChrX:120982476-120985760 (-)
GRCh38
Q5JQC4 (UniProt | EBI)
NM_001080146 (RefSeq)
CT47A2 HGNC:33283 (HGNC)
728090 (Entrez Gene)
300781 (OMIM)
CT47A2 (Alliance of Genome Resources)
ChrX q24 ChrX:120977606-120980928 (-)
GRCh38
Q5JQC4 (UniProt | EBI)
NM_001080145 (RefSeq)
CT47A3 HGNC:33284 (HGNC)
728082 (Entrez Gene)
300782 (OMIM)
CT47A3 (Alliance of Genome Resources)
ChrX q24 ChrX:120972746-120976068 (-)
GRCh38
Q5JQC4 (UniProt | EBI)
NM_001080144 (RefSeq)
CT47A4 HGNC:33285 (HGNC)
728075 (Entrez Gene)
300783 (OMIM)
CT47A4 (Alliance of Genome Resources)
ChrX q24 ChrX:120967886-120971208 (-)
GRCh38
Q5JQC4 (UniProt | EBI)
NM_001080143 (RefSeq)
CT47A5 HGNC:33286 (HGNC)
728072 (Entrez Gene)
300784 (OMIM)
CT47A5 (Alliance of Genome Resources)
ChrX q24 ChrX:120963026-120966348 (-)
GRCh38
Q5JQC4 (UniProt | EBI)
NM_001080142 (RefSeq)
CT47A6 HGNC:33287 (HGNC)
728062 (Entrez Gene)
300785 (OMIM)
CT47A6 (Alliance of Genome Resources)
ChrX q24 ChrX:120958165-120961487 (-)
GRCh38
Q5JQC4 (UniProt | EBI)
NM_001080141 (RefSeq)
CT47A7 HGNC:33288 (HGNC)
653282 (Entrez Gene)
300786 (OMIM)
CT47A7 (Alliance of Genome Resources)
ChrX q24 ChrX:120953282-120956600 (-)
GRCh38
Q5JQC4 (UniProt | EBI)
NM_001080140 (RefSeq)
CT47A8 HGNC:33289 (HGNC)
728049 (Entrez Gene)
300787 (OMIM)
CT47A8 (Alliance of Genome Resources)
ChrX q24 ChrX:120948422-120951744 (-)
GRCh38
Q5JQC4 (UniProt | EBI)
NM_001080139 (RefSeq)
CT47A9 HGNC:33290 (HGNC)
728042 (Entrez Gene)
300788 (OMIM)
CT47A9 (Alliance of Genome Resources)
ChrX q24 ChrX:120943561-120946883 (-)
GRCh38
Q5JQC4 (UniProt | EBI)
NM_001080138 (RefSeq)
CT47A10 HGNC:33291 (HGNC)
728036 (Entrez Gene)
300789 (OMIM)
CT47A10 (Alliance of Genome Resources)
ChrX q24 ChrX:120938701-120942023 (-)
GRCh38
Q5JQC4 (UniProt | EBI)
NM_001080137 (RefSeq)
CT47A11 HGNC:27397 (HGNC)
255313 (Entrez Gene)
300592 (OMIM)
CT47A11 (Alliance of Genome Resources)
ChrX q24 Q5JQC4 (UniProt | EBI)
NM_173571 (RefSeq)
CT47A12 HGNC:33292 (HGNC)
100507170 (Entrez Gene)
CT47A12 (Alliance of Genome Resources)
ChrX Q5JQC4 (UniProt | EBI)
NM_001242922 (RefSeq)
CT47B1 HGNC:33293 (HGNC)
643311 (Entrez Gene)
300790 (OMIM)
CT47B1 (Alliance of Genome Resources)
ChrX q24 ChrX:120872607-120875866 (-)
GRCh38
P0C2W7 (UniProt | EBI)
NM_001145718 (RefSeq)
mouse Ct47 MGI:3644556 (MGI)
621901 (Entrez Gene)
Gene Tree
Ct47 (Alliance of Genome Resources)
ChrX 20.8 cM ChrX:35667130-35668307 (+)
GRCm39
621901 (NCBI Gene Model)
A2A3U9 (UniProt | EBI)
NR_044989 (RefSeq)
rat Ct47b1 RGD:7519078 (Rat Genome Database)
102553745 (Entrez Gene)
Ct47b1 (Alliance of Genome Resources)
ChrX NP_001420004 (RefSeq)
NM_001433074 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory