Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	COL5A2	HGNC:2210 (HGNC) 1290 (Entrez Gene) 120190 (OMIM) COL5A2 (Alliance of Genome Resources)	Chr2 q32.2	Chr2:189031898-189441111 (-) GRCh38	Ehlers-Danlos syndrome Ehlers-Danlos syndrome classic type 2	P05997 (UniProt | EBI) NM_000393 (RefSeq)
mouse	Col5a2	MGI:88458 (MGI) 12832 (Entrez Gene) Gene Tree Col5a2 (Alliance of Genome Resources)	Chr1 23.69 cM	Chr1:45413491-45542442 (-) GRCm39	Ehlers-Danlos syndrome classic type 1	12832 (NCBI Gene Model) Q3U962 (UniProt | EBI) NM_007737 (RefSeq)
rat	Col5a2	RGD:70921 (Rat Genome Database) 85250 (Entrez Gene) Col5a2 (Alliance of Genome Resources)	Chr9 q22			NP_001386124 (RefSeq) NM_053488 (RefSeq)
zebrafish	col5a2a	ZDB-GENE-030616-13 (Zebrafish Model Organism Database) 564821 (Entrez Gene) col5a2a (Alliance of Genome Resources)	Chr9			NP_001139254 (RefSeq) NM_001145782 (RefSeq)
	col5a2b	ZDB-GENE-110406-2 (Zebrafish Model Organism Database) 100006366 (Entrez Gene) col5a2b (Alliance of Genome Resources)	Chr6			XP_001920005 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.