Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	VAMP5	HGNC:12646 (HGNC) 10791 (Entrez Gene) 607029 (OMIM) VAMP5 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:85584431-85593406 (+) GRCh38		O95183 (UniProt | EBI) NM_006634 (RefSeq)
mouse	Vamp5	MGI:1858622 (MGI) 53620 (Entrez Gene) Gene Tree Vamp5 (Alliance of Genome Resources)	Chr6 32.27 cM	Chr6:72345777-72357451 (-) GRCm39		ENSMUSG00000073002 (Ensembl Gene Model) ENSMUSP00000073852 (Ensembl) ENSMUST00000074231 (Ensembl)
rat	Vamp5	RGD:620419 (Rat Genome Database) 89818 (Entrez Gene) Vamp5 (Alliance of Genome Resources)	Chr4 q32			Q9Z2J5 (UniProt | EBI) NM_053555 (RefSeq)
zebrafish	vamp5	ZDB-GENE-030131-4209 (Zebrafish Model Organism Database) 325484 (Entrez Gene) vamp5 (Alliance of Genome Resources)	Chr5			NP_001243535 (RefSeq) NM_001256607 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

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