Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SOCS2	HGNC:19382 (HGNC) 8835 (Entrez Gene) 605117 (OMIM) SOCS2 (Alliance of Genome Resources)	Chr12 q22	Chr12:93569814-93626236 (+) GRCh38	endometrial cancer ovarian carcinoma	O14508 (UniProt | EBI) NM_001270469 (RefSeq)
mouse	Socs2	MGI:1201787 (MGI) 216233 (Entrez Gene) Gene Tree Socs2 (Alliance of Genome Resources)	Chr10 49.35 cM	Chr10:95221224-95253042 (-) GRCm39		ENSMUSG00000020027 (Ensembl Gene Model) ENSMUSP00000121305 (Ensembl) ENSMUST00000139210 (Ensembl)
rat	Socs2	RGD:69273 (Rat Genome Database) 84607 (Entrez Gene) Socs2 (Alliance of Genome Resources)	Chr7 q13			O88582 (UniProt | EBI) NM_058208 (RefSeq)
zebrafish	socs2	ZDB-GENE-041210-171 (Zebrafish Model Organism Database) 562062 (Entrez Gene) socs2 (Alliance of Genome Resources)	Chr4			NP_001108022 (RefSeq) NM_001114550 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Close