Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SNRNP40	HGNC:30857 (HGNC) 9410 (Entrez Gene) 607797 (OMIM) SNRNP40 (Alliance of Genome Resources)	Chr1 p35.2	Chr1:31259568-31296788 (-) GRCh38		Q96DI7 (UniProt | EBI) NM_004814 (RefSeq)
mouse	Snrnp40	MGI:1913835 (MGI) 66585 (Entrez Gene) Gene Tree Snrnp40 (Alliance of Genome Resources)	Chr4 63.43 cM	Chr4:130253925-130283819 (+) GRCm39		ENSMUSG00000074088 (Ensembl Gene Model) ENSMUSP00000101616 (Ensembl) ENSMUST00000105994 (Ensembl)
rat	Snrnp40	RGD:1309198 (Rat Genome Database) 313056 (Entrez Gene) Snrnp40 (Alliance of Genome Resources)	Chr5 q36			NP_001128028 (RefSeq) NM_001134556 (RefSeq)
zebrafish	snrnp40	ZDB-GENE-040426-978 (Zebrafish Model Organism Database) 393292 (Entrez Gene) snrnp40 (Alliance of Genome Resources)	Chr19			NP_956616 (RefSeq) NM_200322 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

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