Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PRKCSH	HGNC:9411 (HGNC) 5589 (Entrez Gene) 177060 (OMIM) PRKCSH (Alliance of Genome Resources)	Chr19 p13.2	Chr19:11435284-11450968 (+) GRCh38	liver disease polycystic liver disease 1	P14314 (UniProt | EBI) NM_001289103 (RefSeq)
mouse	Prkcsh	MGI:107877 (MGI) 19089 (Entrez Gene) Gene Tree Prkcsh (Alliance of Genome Resources)	Chr9 8.04 cM	Chr9:21914314-21925521 (+) GRCm39	polycystic liver disease	19089 (NCBI Gene Model) O08795 (UniProt | EBI) NM_001420126 (RefSeq)
rat	Prkcsh	RGD:1309628 (Rat Genome Database) 300445 (Entrez Gene) Prkcsh (Alliance of Genome Resources)	Chr8 q13			NP_001100276 (RefSeq) NM_001106806 (RefSeq)
zebrafish	prkcsh	ZDB-GENE-040426-770 (Zebrafish Model Organism Database) 394028 (Entrez Gene) prkcsh (Alliance of Genome Resources)	Chr3			NP_957347 (RefSeq) NM_201053 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

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