Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PRDM6	HGNC:9350 (HGNC) 93166 (Entrez Gene) 616982 (OMIM) PRDM6 (Alliance of Genome Resources)	Chr5 q23.2	Chr5:123089241-123194266 (+) GRCh38	patent ductus arteriosus	Q9NQX0 (UniProt | EBI) NM_001136239 (RefSeq)
mouse	Prdm6	MGI:2684938 (MGI) 225518 (Entrez Gene) Gene Tree Prdm6 (Alliance of Genome Resources)	Chr18 29.04 cM	Chr18:53597027-53708976 (+) GRCm39		225518 (NCBI Gene Model) Q3UZD5 (UniProt | EBI) NM_001033281 (RefSeq)
rat	Prdm6	RGD:1559594 (Rat Genome Database) 307305 (Entrez Gene) Prdm6 (Alliance of Genome Resources)	Chr18 q11			NP_001419368 (RefSeq) NM_001432439 (RefSeq)
zebrafish	prdm6	ZDB-GENE-080618-1 (Zebrafish Model Organism Database) 101886516 (Entrez Gene) prdm6 (Alliance of Genome Resources)	Chr8			XP_021334214 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

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