Vertebrate Homology

• Source: Alliance of Genome Resources

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Comparative GO Graph (mouse, human, rat)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PRAMEF1	HGNC:28840 (HGNC) 65121 (Entrez Gene) PRAMEF1 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:12791397-12796628 (+) GRCh38		O95521 (UniProt | EBI) NM_001294139 (RefSeq)
	PRAMEF2	HGNC:28841 (HGNC) 65122 (Entrez Gene) PRAMEF2 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:12857086-12861909 (+) GRCh38		O60811 (UniProt | EBI) NM_023014 (RefSeq)
	PRAMEF4	HGNC:31971 (HGNC) 400735 (Entrez Gene) PRAMEF4 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:12879212-12886201 (-) GRCh38		O60810 (UniProt | EBI) NM_001009611 (RefSeq)
	PRAMEF5	HGNC:27995 (HGNC) 343068 (Entrez Gene) PRAMEF5 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13254198-13263435 (+) GRCh38		Q5TYX0 (UniProt | EBI) NM_001013407 (RefSeq)
	PRAMEF6	HGNC:30583 (HGNC) 440561 (Entrez Gene) PRAMEF6 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:12938472-12947580 (-) GRCh38		Q5VXH4 (UniProt | EBI) NM_001010889 (RefSeq)
	PRAMEF7	HGNC:28415 (HGNC) 441871 (Entrez Gene) PRAMEF7 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:12916610-12920751 (+) GRCh38		Q5VXH5 (UniProt | EBI) NM_001012277 (RefSeq)
	PRAMEF8	HGNC:24074 (HGNC) 391002 (Entrez Gene) PRAMEF8 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13281304-13285137 (-) GRCh38		Q5VWM4 (UniProt | EBI) NM_001012276 (RefSeq)
	PRAMEF9	HGNC:27996 (HGNC) 343070 (Entrez Gene) PRAMEF9 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13171848-13179459 (+) GRCh38		P0DUQ2 (UniProt | EBI) NM_001010890 (RefSeq)
	PRAMEF10	HGNC:27997 (HGNC) 343071 (Entrez Gene) PRAMEF10 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:12892896-12898270 (-) GRCh38		O60809 (UniProt | EBI) NM_001039361 (RefSeq)
	PRAMEF11	HGNC:14086 (HGNC) 440560 (Entrez Gene) PRAMEF11 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:12824605-12831410 (-) GRCh38		O60813 (UniProt | EBI) NM_001146344 (RefSeq)
	PRAMEF12	HGNC:22125 (HGNC) 390999 (Entrez Gene) PRAMEF12 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:12773738-12777906 (+) GRCh38		O95522 (UniProt | EBI) NM_001080830 (RefSeq)
	PRAMEF13	HGNC:13262 (HGNC) 400736 (Entrez Gene) PRAMEF13 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13196188-13201409 (-) GRCh38		Q5VWM6 (UniProt | EBI) NM_001291380 (RefSeq)
	PRAMEF15	HGNC:26764 (HGNC) 653619 (Entrez Gene) PRAMEF15 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13315581-13322598 (+) GRCh38		P0DUQ1 (UniProt | EBI) NM_001098376 (RefSeq)
	PRAMEF17	HGNC:29485 (HGNC) 391004 (Entrez Gene) PRAMEF17 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13389632-13392629 (+) GRCh38		Q5VTA0 (UniProt | EBI) NM_001099851 (RefSeq)
	PRAMEF18	HGNC:30693 (HGNC) 391003 (Entrez Gene) PRAMEF18 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13222695-13226154 (-) GRCh38		Q5VWM3 (UniProt | EBI) NM_001099850 (RefSeq)
	PRAMEF19	HGNC:24908 (HGNC) 645414 (Entrez Gene) PRAMEF19 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13368431-13371947 (-) GRCh38		Q5SWL8 (UniProt | EBI) NM_001099790 (RefSeq)
	PRAMEF20	HGNC:25224 (HGNC) 645425 (Entrez Gene) PRAMEF20 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13410450-13421328 (+) GRCh38		Q5VT98 (UniProt | EBI) NM_001099852 (RefSeq)
	PRAMEF25	HGNC:49179 (HGNC) 441873 (Entrez Gene) PRAMEF25 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13068677-13077884 (+) GRCh38		A6NGN4 (UniProt | EBI) NM_001310134 (RefSeq)
	PRAMEF26	HGNC:49178 (HGNC) 645359 (Entrez Gene) PRAMEF26 (Alliance of Genome Resources)	Chr1 p36.21			H0Y7S4 (UniProt | EBI) NM_001306072 (RefSeq)
	PRAMEF27	HGNC:51234 (HGNC) 101929983 (Entrez Gene) PRAMEF27 (Alliance of Genome Resources)	Chr	Chr1:13049476-13056575 (-) GRCh38		A3QJZ7 (UniProt | EBI) NM_001300891 (RefSeq)
	PRAMEF33	HGNC:49193 (HGNC) 645382 (Entrez Gene) PRAMEF33 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13303539-13308907 (+) GRCh38		A0A0G2JMD5 (UniProt | EBI) NM_001291381 (RefSeq)
mouse	Pramel43	MGI:3781326 (MGI) 100041115 (Entrez Gene) Gene Tree Pramel43 (Alliance of Genome Resources)	Chr5 47.29 cM	Chr5:94760164-94764199 (-) GRCm39		100041115 (NCBI Gene Model) A0A0J9YU88 (UniProt | EBI) XM_001476310 (RefSeq)
rat	Pramef8-ps1	RGD:1591399 (Rat Genome Database) 685614 (Entrez Gene) Pramef8-ps1 (Alliance of Genome Resources)	Chr14 p22
	Pramel36	RGD:1565660 (Rat Genome Database) 501896 (Entrez Gene) Pramel36 (Alliance of Genome Resources)	Chr14 p22			XP_003751380 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.