Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PCOLCE2	HGNC:8739 (HGNC) 26577 (Entrez Gene) 607064 (OMIM) PCOLCE2 (Alliance of Genome Resources)	Chr3 q23	Chr3:142815922-142889206 (-) GRCh38		Q9UKZ9 (UniProt | EBI) NM_013363 (RefSeq)
mouse	Pcolce2	MGI:1923727 (MGI) 76477 (Entrez Gene) Gene Tree Pcolce2 (Alliance of Genome Resources)	Chr9 50.18 cM	Chr9:95519681-95577604 (+) GRCm39		76477 (NCBI Gene Model) Q8R4W6 (UniProt | EBI) NM_029620 (RefSeq)
rat	Pcolce2	RGD:1595195 (Rat Genome Database) 684050 (Entrez Gene) Pcolce2 (Alliance of Genome Resources)	Chr8			NP_001121112 (RefSeq) NM_001127640 (RefSeq)
zebrafish	pcolce2a	ZDB-GENE-070705-25 (Zebrafish Model Organism Database) 100002838 (Entrez Gene) pcolce2a (Alliance of Genome Resources)	Chr2			XP_009295891 (RefSeq)
	pcolce2b	ZDB-GENE-040426-1177 (Zebrafish Model Organism Database) 393432 (Entrez Gene) pcolce2b (Alliance of Genome Resources)	Chr24			NP_956754 (RefSeq) NM_200460 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.