Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  17
• Reference
  J:42498 Schweifer N, et al., Characterization of the C3 YAC contig from proximal mouse chromosome 17 and analysis of allelic expression of genes flanking the imprinted Igf2r gene. Genomics. 1997 Aug 1;43(3):285-97
• ID
  MGI:1097109

Genes

Gene	Assay Type	Description
Map3k4	overlapping clones	YAC-940, YAC-8G
Plg	overlapping clones	YAC-940, YAC-8G
Slc22a1	overlapping clones	YAC-940, YAC-8G, YAC-TS, AF
Igf2r	overlapping clones	YAC-940, YAC-8G, YAC-TS, 3L, 4L
D17Aus76	overlapping clones	YAC-940, YAC-TS, MS6
Mas1	overlapping clones	YAC-940, YAC-TS, MS1, MS5
Tcp1	overlapping clones	YAC-940, YAC-TS, LA2, LA1
Acat2	overlapping clones	YAC-940, YAC-TS, LA1
Acat3	overlapping clones	YAC-940, YAC-TS, LA1
Sod2	overlapping clones	YAC-TS
D17Leh66D	overlapping clones	YAC-TS

Notes

• Reference
  Authors use D17Leh66, Tcp1x, D17Rp17, D17Aus76ps and Lx1 for locus symbols D17Leh66D, Tcp1-rs1, D17Rp17e, D17Aus76 and Orct respectively.
• Experiment
  The region of mouse Chromosome 17 involving the t^Lub2 deletion region was physically mapped using YACs and cosmids analyzed by PFGE and Restriction Enzyme assays. The following gene order/orientation is reported (rough distances determined from figure): centromere - D17Rp17e - ~80kb - 5' Plg 3' - ~150kb - Slc22a1 - ~20kb - 3'Igf2r 5' - ~30kb - D17Aus76 - ~15kb - 3' Mas1 5' - ~ 85kb - Tcp1/Acat2 - ~5kb - Acat2/Acat3 - ~ 30kb - Sod2 - ~10kb - D17Leh66D. The t^Lub2 deletion region is shown to extend fromappoximately 40kb distal of Plg to the distal end of Sod2.